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EGAS00001000644 GoNL raw sequence data in fastq format
Raw sequencing data for all samples in fastq format. -
EGAS00001000644 GoNL aligned sequence data in BAM format.
We mapped the data to the UCSC human reference genome build 37 using BWA 0.5.9-r16. We first mapped each read pair separately using bwa aln. Then we used bwa sampe to map the... -
EGAS00001000644 GoNL release 5 haplotype panel
The samples in this panel come from 250 families: 248 parents-child trios and 2 parent-child duos. As the children do not provide additional haplotypes or population... -
EGAS00001000644 GoNL release 5 raw SNV calls
These files contain a total of 20.4M SNVs and the complete information output by the GATK UnifiedGenotyper v1.4 on all 767 GoNL samples. These calls are not trio-aware and all...